Genome of striped eel catfish (<i>Plotosus lineatus</i>) provides insights into the adaptive evolution of amphidromous fish

Feng Shao; Ze-Chen Wu; Yuan Xu; Ping Li; Zuo-Gang Peng

doi:10.24272/j.issn.2095-8137.2022.387

Volume 44 Issue 2

Mar. 2023

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Article Navigation > Zoological Research > 2023 > 44(2): 349-352

Feng Shao, Ze-Chen Wu, Yuan Xu, Ping Li, Zuo-Gang Peng. Genome of striped eel catfish (Plotosus lineatus) provides insights into the adaptive evolution of amphidromous fish. Zoological Research, 2023, 44(2): 349-352. doi: 10.24272/j.issn.2095-8137.2022.387

Citation:

Feng Shao, Ze-Chen Wu, Yuan Xu, Ping Li, Zuo-Gang Peng. Genome of striped eel catfish (Plotosus lineatus) provides insights into the adaptive evolution of amphidromous fish. Zoological Research, 2023, 44(2): 349-352. doi: 10.24272/j.issn.2095-8137.2022.387

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Genome of striped eel catfish (Plotosus lineatus) provides insights into the adaptive evolution of amphidromous fish

doi: 10.24272/j.issn.2095-8137.2022.387

Feng Shao¹,
Ze-Chen Wu¹,
Yuan Xu¹,
Ping Li²,
Zuo-Gang Peng^{1, 3
,
,}

1.
Key Laboratory of Freshwater Fish Reproduction and Development (Ministry of Education), Southwest University School of Life Sciences, Chongqing 400715, China
2.
College of Fisheries, Southwest University, Rongchang, Chongqing 402460, China
3.
Academy of Plateau Science and Sustainability, Qinghai Normal University, Xining, Qinghai 810008, China

The striped eel catfish chromosome-level genome and genome sequencing data used in the present study, including Nanopore, PacBio, MGISEQ2000, Hi-C, and transcriptome data, are available from the Sequence Read Archive (SRA) with the BioProjectID PRJNA720277. The above data were also archived in the Science Data Bank database (DOI: 10.57760/sciencedb.06933) and Genome Sequence Archive (GSA) database (CRA009258).
Supplementary data to this article can be found online.
The authors declare that they have no competing interests.
F.S. and Z.G.P. conceived the study and wrote the manuscript. F.S. and P.L. conducted field sample collection and prepared samples for sequencing. F.S. conducted bioinformatics analysis. Z.C.W. manually checked the genes under study. Y.X. participated in the construction of the ancestral genome of catfish. All authors read and approved the final version of the manuscript.

Funds: This work was supported by the National Natural Science Foundation of China (31872204) and Fundamental Research Funds for the Central Universities (SWU120049)

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Corresponding author: E-mail: pzg@swu.edu.cn
Received Date: 2022-12-03
Accepted Date: 2022-02-20

Published Online: 2023-02-20

Publish Date: 2023-03-18

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References(11)

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